![]() Check also the *PAIREF* homepage at ``_ and `PyPI repository `_. More information are available in `documentation `_. *PAIREF* can be easily installed running command :code:`cctbx.python -m pip install pairef -user -no-deps` in terminal (GNU/Linux, macOS) or CCP4Console (Windows). *PAIREF* works with both Python 2 and Python 3. Both contain the `Computational Crystallography Toolbox `_ with Python and `pip `_). *PAIREF* depends on the `CCP4 Software Suite `_ or `PHENIX `_. Diederichs: "Linking crystallographic model and data quality." (2012) Science, 336(6084):1030-3. image:: README_images/example_free_work.gif ![]() *PAIREF* supports `REFMAC5 `_ (part of the `CCP4 Software Suite `_) and `phenix.refine `_ (part of the `PHENIX `_) for structure model refinement. Obtained results are presented as plots and tables in HTML log file. Parameters of refinement can be specified in detail to put all the calculations under full control of the user. It provides graphical and command-line interface that executes all the needed calculations. It is developed in Python and can be installed as a module into the `Computational Crystallography Toolbox `_. *PAIREF* is a tool for macromolecular crystallographers that performs the *PAIRed REFinement protocol* _ automatically to estimate the optimal high-resolution cutoff.
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